- Tankus A., Fried I. & Shoham S., Cognitive-motor brain–machine interfaces, Journal of Physiology-Paris, 108(1), 38-44 (2014). doi: 10.1016/j.jphysparis.2013.05.00
- Tankus A., Fried I. & Shoham S., Sparse decoding of multiple spike trains for brain-machine interfaces, Journal of Neural Engineering, 9(5), 054001 (2012). doi: 10.1088/1741-2560/9/5/054001.
- Tankus A., Fried I. & Shoham S., Structured neuronal encoding and decoding of human speech features, Nature Communications, 3, 1015 (2012). doi: 10.1038/ncomms1995.
Media: Press Release, Daily Mail, Jerusalem Post, Haaretz (Hebrew, English), Radio Interview (Hebrew) - Krumin M., Reutsky I. & Shoham S., Correlation-based analysis and generation of multiple spike trains using Hawkes models with an exogenous input, Frontiers in Computational Neuroscience, 4, 147 (2010). doi: 10.3389/fncom.2010.00147.
- Krumin M. & Shoham S., Multivariate auto-regressive modeling and Granger causality analysis of multiple spike trains, Computational Intelligence and Neuroscience, 2010, (2010). doi: 10.1155/2010/752428.
- Yaeli S.*, Binyamin E.* & Shoham S., Form-function relations in cone-tipped stimulating microelectrodes, Frontiers in Neuroengineering [special issue on microelectrode technology for electrostimulation], 2(13), (2009). doi: 10.3389/neuro.16.013.2009.
- Krumin M., Shimron A. & Shoham S., Correlation-distortion based identification of Linear-Nonlinear-Poisson models, Journal of Computational Neuroscience [special issue on analysis of neural data], 29(1-2), 301-308 (2009). doi: 10.1007/s10827-009-0184-0.
- Krumin M. & Shoham S., Generation of Spike Trains with Controlled Auto- and Cross-Correlation Functions, Neural Computation, 21(6), 1642-1664 (2009). doi: 10.1162/neco.2009.08-08-847.
- Bobrowski O., Meir R., Shoham S. & Eldar Y.C., A neural network implementing optimal state estimation based on dynamic spike train decoding, NIPS (2007).
- Osan R., Zhu L., Shoham S. & Tsien J.Z., Subspace Projection Approaches to Classification and Visualization of Neural Network-Level Encoding Patterns, PLoS ONE, 2(5), e404 (2007). doi: 10.1371/journal.pone.0000404.
- Guillory K.S., Shoham S. & Normann R.A., Discrete stimulus estimation from neural responses in the turtle retina, Vision Research, 46(12), 1876-1885 (2006). doi:10.1016/j.visres.2005.12.001.
- Shoham S., O`Connor D. & Segev R., How silent is the brain: is there a ‘‘dark matter’’ problem in neuroscience?, Journal of Comparative Physiology A: Neuroethology, Sensory, Neural, and Behavioral Physiology ,192(8), 777-784 (2006). doi:10.1007/s00359-006-0117-6.
- Shoham S., Paninski L., Fellows M.R., Hatsopoulos N.G., Donoghue J.P. & Normann R.A., Statistical Encoding Model for a Primary Motor Cortical Brain-Machine Interface, IEEE Transactions on Biomedical Engineering, 52(7), 1312-1322 (2005). doi:10.1109/TBME.2005.847542.
- Lin L.*, Osan R.*, Shoham S., Zuo W., Jin W. & Tsien J.Z., Identification of network-level coding units for real-time representation of episodic experiences in the hippocampus, PNAS, 102(17), 6125-6130 (2005). doi: 10.1073/pnas.0408233102.
- Paninski L., Shoham S., Fellows M.R., Hatsopoulos N.G. & Donoghue J.P., Superlinear Population Encoding of Dynamic Hand Trajectory in Primary Motor Cortex, Journal of Neuroscience, 24(39), 8551-8561 (2004). doi: 10.1523/JNEUROSCI.0919-04.2004.
- Shoham S. & Nagarajan S.S., The Theory of CNS Recording, in: Neurprosthetics: Theory and Applications, Horch KW & Dhillon GS editors, World scientific, New Jersey (2004).
- Reed C.L., Shoham S. & Halgren E., Neural substrates of tactile object recognition: an fMRI Study, Human Brain Mapping, 21(4), 236-246 (2004). doi: 10.1002/hbm.10162.
- Shoham S., Fellows M.R. & Normann R.A., Robust, automatic spike sorting using mixtures of multivariate t-distributions, Journal of Neuroscience Methods, 127(2), 111-122 (2003). doi: 10.1016/S0165-0270(03)00120-1.
- Shoham S., Robust clustering bydeterministic agglomeration EM of mixtures of multivariate t-distributions, Pattern Recognition, 35(5), 1127-1142 (2002).
- Shoham S., Halgren E., Maynard E.M., & Normann R.A., Motor-cortical activity in tetraplegics, Nature, 413, 793 (2001). doi: 10.1038/35101651.